Fix the improper use of LOCAL_WHOLE_STATIC_LIBRARIES.

If two libraries both use LOCAL_WHOLE_STATIC_LIBRARIES and include a same
library, there would be linking errors when generating a shared library
(or executable) that depends on the two libraries both.

Also clean up Android.mk files.

Remove the "LOCAL_MODULE_TAGS := eng" line for the updater module. The
module will then default to "optional" which won't be built until needed.

Change-Id: I3ec227109b8aa744b7568e7f82f575aae3fe0e6f

applypatch/freecache.cpp

@@ -32,7 +32,7 @@
 #include <android-base/parseint.h>
 #include <android-base/stringprintf.h>
 
-#include "applypatch.h"
+#include "applypatch/applypatch.h"
 
 static int EliminateOpenFiles(std::set<std::string>* files) {
   std::unique_ptr<DIR, decltype(&closedir)> d(opendir("/proc"), closedir);